BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034E03LP1|AL429907
(862 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1655 180 3e-45
>3x_Contig1655
Length = 16228
Score = 180 bits (90), Expect = 3e-45
Identities = 220/264 (83%)
Strand = Plus / Plus
Query: 166 aatttttttttacccaatttcaccaattatatattcyaatttactctattaaytaaattt 225
|||||| | |||||||| ||||||||| |||||||| |||| |||||||||| |||
Sbjct: 2440 aattttgtgttacccaagttcaccaatgatatattcgaattgactctattaaggaaaggg 2499
Query: 226 catatatatactctaaattctttaaawatactacahcytccttcctttccttaatttcat 285
|| ||| | || |||||||||||||| | || ||| | |||| ||| |||| |||| |||
Sbjct: 2500 cagatagagacgctaaattctttaaagagacgacagcttcctgcctgtcctgaattgcat 2559
Query: 286 tttaacaatatataattttttatccattattttccattcaacaccttttcttttttaatt 345
|| ||||||||| |||||| |||||| || | ||||||||||||||||| |||||||
Sbjct: 2560 ttgaacaatatagaattttggatccatgatgtgccattcaacaccttttcgtttttaagg 2619
Query: 346 tttttattttttttcatattcataactttaatatctttacttccaatctttttcccattt 405
| |||||| |||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 2620 tggttatttgttttcatattcataactttaatatctttacttccaatcgttggcccattg 2679
Query: 406 tcctctactatatttcaaacacca 429
|| |||||||||| |||||||||
Sbjct: 2680 gccgctactatattgcaaacacca 2703
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 31,771
Number of Sequences: 1807
Number of extensions: 31771
Number of successful extensions: 791
Number of sequences better than 1.0e-20: 1
length of query: 862
length of database: 10,358,551
effective HSP length: 16
effective length of query: 846
effective length of database: 10,329,639
effective search space: 8738874594
effective search space used: 8738874594
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)